Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807920.1_cds_XP_016495056.1_9406
CDS Infomation

[gene=LOC107814206] [db_xref=GeneID:107814206] [protein=general transcription factor IIE subunit 1-like isoform X3] [protein_id=XP_016495056.1] [location=join(6320..6342,6437..6559,6827..6947,7956..8084,8420..8529,8620..8803,10795..10989,11662..11889,12033..12231,14242..14297)] [gbkey=CDS]
Sequence

ATGAGTATTGAACCCTTTAATCGATTGGTCAAACTTGCGGCTAGAGCTTTCTACGATGAC
ATTACGACTAAAGGCGACAATCAGCCCAAATCCGGCAGAAGTGACAATCGAGGAATTGCG
GTGGTCATTCTAGACGCACTCACAAGGCGGCAATGGGTGAGGGAAGAAGACTTGGCAAAG
GATTTGAAGTTGCACACAAAGCAACTCCGGCGCACCTTGCGTTTCTTTGAAGAAGAAAAG
CTCATCACGCGAGATCATAGGAAAGAGGGAGCAAAAGGTGCAAAAGTATACAATGCTGCA
GTTGCAGCTACAGTTGATGTCCTGCAGAATGGGAAAGAAGGAGATGACAAAATAAAGATG
CATACTCATTCTTATTGCTGCCTGGACTATTCTCAGATATTTGATGTCGTGAGGTACAGA
CTACACCGAATGAAGAAAAAGTTAAGAGATGAGCTGGATAACAAAAACACAGTGCAGGAG
TATATATGTCCCAATTGTGGGAAAAGATATACCGCGTTGGATGCATTGCGGTTGGTGTCT
CCTGAGGATGAGTACTTCCACTGCGAAAGTTGCAACGGGGAACTAGTGGCAGAGAGCGAC
AAGTTATCCTCTCAAGGGACTGTAGATGGGGATGATAAGGATAGGAGACGGCGTCGTGAA
AAATTGGAAGACATGCTTCATAGGATGGAGGCACAACTCAAACCGTTGATGGATCAACTT
AACAGAGTAAAAGATTTACCTGCTCCCGAGTTTGGAAGCCTTCAAGCGTGGGAAGTGCGA
GCCAATGCTGTGGCCCGAGGTGCAAATGGAGATAATGCAAATGACCCTTCAAAGTCAGGA
CAAGGATTTGGTGGAACACCTATGCCTTTTGTTGGAGAGACAAAGGTTGAAGTTGCTTTC
TCTGGTCTTGAAGAAAAAGGAGATATCAAATCTGAGATTTCAGCTACACCAATGAAAGTT
TTGCCTCCATGGATGATAAAGGAGGGAATGAATCTTACAAAGGAGCAGCGTGGAGAGGTC
AAGCAAGAGTCCAATATGGAGGGTAGTTCTGCTGCAGCGGGGTCATCTGACGACAAGAAG
TCCATAGAAACTGAGGACGTGAAAAATATAAAGGATGAATATGTTAAGGCATATTATGAG
GCTCTATTCAAGCGACAGAGAGAGCAAGAAGAAGCTACCAAAAGTTTACAGGAACCATCA
ACTACAGATGGAGTGGATAACACCTCTACTGAGCGCCACGTCGGCATGAAATCTAAACGT
GAAGAGGAGGATGAAGGAGAGGATATTGAATGGGAGGAGGCCCCACCTGCAGATGCTTCA
GGAGATGACAACGATGAGGAAGATGACATAGACTGGGAGGAAGGTTGA

Peptide Sequence

PEP ID

XP_016495056.1
PEP Infomation

PREDICTED: general transcription factor IIE subunit 1-like isoform X3 [Nicotiana tabacum]
Sequence

MSIEPFNRLVKLAARAFYDDITTKGDNQPKSGRSDNRGIAVVILDALTRRQWVREEDLAK
DLKLHTKQLRRTLRFFEEEKLITRDHRKEGAKGAKVYNAAVAATVDVLQNGKEGDDKIKM
HTHSYCCLDYSQIFDVVRYRLHRMKKKLRDELDNKNTVQEYICPNCGKRYTALDALRLVS
PEDEYFHCESCNGELVAESDKLSSQGTVDGDDKDRRRRREKLEDMLHRMEAQLKPLMDQL
NRVKDLPAPEFGSLQAWEVRANAVARGANGDNANDPSKSGQGFGGTPMPFVGETKVEVAF
SGLEEKGDIKSEISATPMKVLPPWMIKEGMNLTKEQRGEVKQESNMEGSSAAAGSSDDKK
SIETEDVKNIKDEYVKAYYEALFKRQREQEEATKSLQEPSTTDGVDNTSTERHVGMKSKR
EEEDEGEDIEWEEAPPADASGDDNDEEDDIDWEEG

Transcript Sequence

Gene sequence data has not been registered.